The Interaction between the Host Genome, Epigenome, and the Gut-Skin Axis Microbiome in Atopic Dermatitis
Carregando...
Citações na Scopus
2
Tipo de produção
article
Data de publicação
2023
Título da Revista
ISSN da Revista
Título do Volume
Editora
MDPI
Autores
Citação
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, v.24, n.18, article ID 14322, 17p, 2023
Resumo
Atopic dermatitis (AD) is a chronic inflammatory skin disease that occurs in genetically predisposed individuals. It involves complex interactions among the host immune system, environmental factors (such as skin barrier dysfunction), and microbial dysbiosis. Genome-wide association studies (GWAS) have identified AD risk alleles; however, the associated environmental factors remain largely unknown. Recent evidence suggests that altered microbiota composition (dysbiosis) in the skin and gut may contribute to the pathogenesis of AD. Examples of environmental factors that contribute to skin barrier dysfunction and microbial dysbiosis in AD include allergens, irritants, pollution, and microbial exposure. Studies have reported alterations in the gut microbiome structure in patients with AD compared to control subjects, characterized by increased abundance of Clostridium difficile and decreased abundance of short-chain fatty acid (SCFA)-producing bacteria such as Bifidobacterium. SCFAs play a critical role in maintaining host health, and reduced SCFA production may lead to intestinal inflammation in AD patients. The specific mechanisms through which dysbiotic bacteria and their metabolites interact with the host genome and epigenome to cause autoimmunity in AD are still unknown. By understanding the combination of environmental factors, such as gut microbiota, the genetic and epigenetic determinants that are associated with the development of autoantibodies may help unravel the pathophysiology of the disease. This review aims to elucidate the interactions between the immune system, susceptibility genes, epigenetic factors, and the gut microbiome in the development of AD.
Palavras-chave
microbial dysbiosis, intestinal permeability, immuno-regulation, short-chain fatty acid, virome, single nucleotide polymorphism, genetics, epigenetics
Referências
- Ab Hadi H, 2021, LIFE-BASEL, V11, DOI 10.3390/life11090936
- Abrahamsson TR, 2012, J ALLERGY CLIN IMMUN, V129, P434, DOI 10.1016/j.jaci.2011.10.025
- Abreu D, 2021, IMMUNOL ALLERGY CLIN, V41, P347, DOI 10.1016/j.iac.2021.04.011
- ADLERBERTH I, 1991, ACTA PAEDIATR SCAND, V80, P602, DOI 10.1111/j.1651-2227.1991.tb11917.x
- Alves E, 2022, INT J ENV RES PUB HE, V19, DOI 10.3390/ijerph192113791
- Apfelbacher CJ, 2011, ALLERGY, V66, P206, DOI 10.1111/j.1398-9995.2010.02464.x
- Arboleya S, 2018, ANN NUTR METAB, V73, P17, DOI 10.1159/000490843
- Arpaia N, 2013, NATURE, V504, P451, DOI 10.1038/nature12726
- Belyhun Y, 2010, CLIN EXP ALLERGY, V40, P619, DOI 10.1111/j.1365-2222.2010.03479.x
- Blackshaw S, 2004, PLOS BIOL, V2, P1411, DOI 10.1371/journal.pbio.0020247
- Bylund S, 2020, ACTA DERM-VENEREOL, V100, P320, DOI 10.2340/00015555-3510
- Ismail IH, 2016, PEDIAT ALLERG IMM-UK, V27, P838, DOI 10.1111/pai.12646
- Jakobsson HE, 2014, GUT, V63, P559, DOI 10.1136/gutjnl-2012-303249
- Jedrychowski W, 2011, INT ARCH ALLERGY IMM, V155, P275, DOI 10.1159/000320376
- Jiang XY, 2023, INT IMMUNOPHARMACOL, V118, DOI 10.1016/j.intimp.2023.110005
- Kalliomäki M, 2003, LANCET, V361, P1869, DOI 10.1016/S0140-6736(03)13490-3
- Kalliomäki M, 2001, LANCET, V357, P1076, DOI 10.1016/S0140-6736(00)04259-8
- Kang MJ, 2021, ALLERGY ASTHMA IMMUN, V13, P404, DOI 10.4168/aair.2021.13.3.404
- Kantor R, 2017, EXPERT REV CLIN IMMU, V13, P15, DOI 10.1080/1744666X.2016.1212660
- Kao MS, 2017, BIOTECHNOL J, V12, DOI 10.1002/biot.201600399
- Kato A, 2003, BRIT J DERMATOL, V148, P665, DOI 10.1046/j.1365-2133.2003.05243.x
- Piewngam P, 2018, NATURE, V562, P532, DOI 10.1038/s41586-018-0616-y
- Kepert I, 2017, J ALLERGY CLIN IMMUN, V139, P1525, DOI 10.1016/j.jaci.2016.09.003
- Kim BJ, 2014, ALLERGY ASTHMA IMMUN, V6, P389, DOI 10.4168/aair.2014.6.5.389
- Kim CH, 2021, CELL MOL IMMUNOL, V18, P1161, DOI 10.1038/s41423-020-00625-0
- Kim JY, 2010, PEDIAT ALLERG IMM-UK, V21, pE386, DOI 10.1111/j.1399-3038.2009.00958.x
- Kim JH, 2021, EXP MOL MED, V53, P907, DOI 10.1038/s12276-021-00627-6
- Krol J, 2010, NAT REV GENET, V11, P597, DOI 10.1038/nrg2843
- Landman C, 2016, REV MED INTERNE, V37, P418, DOI 10.1016/j.revmed.2015.12.012
- LARSEN FS, 1993, J AM ACAD DERMATOL, V28, P719, DOI 10.1016/0190-9622(93)70099-F
- Larsen FS, 1996, J AM ACAD DERMATOL, V34, P760, DOI 10.1016/S0190-9622(96)90009-2
- Laubereau B, 2004, ARCH DIS CHILD, V89, P993, DOI 10.1136/adc.2003.043265
- Qin YF, 2018, J BIOCHEM, V163, P105, DOI 10.1093/jb/mvx080
- Lee E, 2016, ANN ALLERG ASTHMA IM, V117, P91, DOI 10.1016/j.anai.2016.04.019
- Lee JY, 2012, INT ARCH ALLERGY IMM, V157, P363, DOI 10.1159/000328778
- Lee SY, 2018, ALLERGY ASTHMA IMMUN, V10, P354, DOI 10.4168/aair.2018.10.4.354
- Levkovich T, 2013, PLOS ONE, V8, DOI 10.1371/journal.pone.0053867
- Li HM, 2019, CLIN EXP DERMATOL, V44, P257, DOI 10.1111/ced.13691
- Li MH, 2020, MOL MED, V26, DOI 10.1186/s10020-020-00234-7
- Liew WC, 2020, J ALLERGY CLIN IMMUN, V146, P606, DOI 10.1016/j.jaci.2020.02.007
- Lin RJ, 2015, EXP THER MED, V9, P1593, DOI 10.3892/etm.2015.2299
- Liu YL, 2022, FRONT PUBLIC HEALTH, V10, DOI 10.3389/fpubh.2022.844832
- Loset M, 2019, DERMATOLOGY, V235, P355, DOI 10.1159/000500402
- Qu ZH, 2022, LIFE SCI, V304, DOI 10.1016/j.lfs.2022.120719
- Louis P, 2017, ENVIRON MICROBIOL, V19, P29, DOI 10.1111/1462-2920.13589
- Lu X, 2022, FRONT MED-LAUSANNE, V9, DOI 10.3389/fmed.2022.835467
- Macia L, 2012, IMMUNOL REV, V245, P164, DOI 10.1111/j.1600-065X.2011.01080.x
- Mack MR, 2020, SCI TRANSL MED, V12, DOI 10.1126/scitranslmed.aay1005
- Margolis DJ, 2014, J ALLERGY CLIN IMMUN, V133, P784, DOI 10.1016/j.jaci.2013.09.015
- Martin MJ, 2020, GENES-BASEL, V11, DOI 10.3390/genes11040442
- Mashiah J, 2022, IMMUN INFLAMM DIS, V10, DOI 10.1002/iid3.570
- Rodríguez JM, 2015, MICROB ECOL HEALTH D, V26, DOI 10.3402/mehd.v26.26050
- Mok K, 2021, J FUNGI, V7, DOI 10.3390/jof7090748
- Moro G, 2006, ARCH DIS CHILD, V91, P814, DOI 10.1136/adc.2006.098251
- Quaranta M, 2014, SCI TRANSL MED, V6, DOI 10.1126/scitranslmed.3008946
- Morrison DJ, 2016, GUT MICROBES, V7, P189, DOI 10.1080/19490976.2015.1134082
- Mubanga M, 2021, JAMA NETW OPEN, V4, DOI 10.1001/jamanetworkopen.2021.5245
- Nakamura T, 2006, ARCH DERMATOL RES, V298, P253, DOI 10.1007/s00403-006-0682-0
- Nedoszytko B, 2020, INT J MOL SCI, V21, DOI 10.3390/ijms21186484
- Negele K, 2004, PEDIAT ALLERG IMM-UK, V15, P48, DOI 10.1046/j.0905-6157.2003.00101.x
- Noh YH, 2018, ANIM CELLS SYST, V22, P172, DOI 10.1080/19768354.2018.1458652
- Nylund L, 2015, ALLERGY, V70, P241, DOI 10.1111/all.12549
- Nylund L, 2013, BMC MICROBIOL, V13, DOI 10.1186/1471-2180-13-12
- O'Connell RM, 2012, ANNU REV IMMUNOL, V30, P295, DOI 10.1146/annurev-immunol-020711-075013
- Odhiambo JA, 2009, J ALLERGY CLIN IMMUN, V124, P1251, DOI 10.1016/j.jaci.2009.10.009
- Rakyan VK, 2004, PLOS BIOL, V2, P2170, DOI 10.1371/journal.pbio.0020405
- Paller AS, 2021, J AM ACAD DERMATOL, V84, P632, DOI 10.1016/j.jaad.2020.05.135
- Paternoster L, 2015, NAT GENET, V47, P1449, DOI 10.1038/ng.3424
- Paternoster L, 2012, NAT GENET, V44, P187, DOI 10.1038/ng.1017
- Penders J, 2006, CLIN EXP ALLERGY, V36, P1602, DOI 10.1111/j.1365-2222.2006.02599.x
- Rebane A, 2014, J ALLERGY CLIN IMMUN, V134, P836, DOI 10.1016/j.jaci.2014.05.022
- Reichardt N, 2014, ISME J, V8, P1323, DOI 10.1038/ismej.2014.14
- Rey FE, 2010, J BIOL CHEM, V285, P22082, DOI 10.1074/jbc.M110.117713
- Rinninella E, 2019, MICROORGANISMS, V7, DOI 10.3390/microorganisms7010014
- Ro ADB, 2017, CLIN EXP ALLERGY, V47, P1014, DOI 10.1111/cea.12930
- Canfora EE, 2017, CURR OPIN CLIN NUTR, V20, P477, DOI [10.1097/MCO.0000000000000408, 10.1097/mco.0000000000000408]
- Roager HM, 2018, NAT COMMUN, V9, DOI 10.1038/s41467-018-05470-4
- Rothschild D, 2018, NATURE, V555, P210, DOI 10.1038/nature25973
- Saffouri GB, 2019, NAT COMMUN, V10, DOI 10.1038/s41467-019-09964-7
- Schmid-Grendelmeier P, 2005, J ALLERGY CLIN IMMUN, V115, P1068, DOI 10.1016/j.jaci.2005.01.065
- Schulthess J, 2019, IMMUNITY, V50, P432, DOI 10.1016/j.immuni.2018.12.018
- Segain JP, 2000, GUT, V47, P397, DOI 10.1136/gut.47.3.397
- Shao Y, 2019, NATURE, V574, P117, DOI 10.1038/s41586-019-1560-1
- Shaw TE, 2011, J INVEST DERMATOL, V131, P67, DOI 10.1038/jid.2010.251
- Shreiner AB, 2015, CURR OPIN GASTROEN, V31, P69, DOI 10.1097/MOG.0000000000000139
- Sikora M, 2021, DERMATOLOGY THER, V11, P1277, DOI 10.1007/s13555-021-00547-3
- Carlier TD, 2021, J AUTOIMMUN, V120, DOI 10.1016/j.jaut.2021.102634
- Simpson MR, 2015, BMC DERMATOL, V15, DOI 10.1186/s12895-015-0030-1
- Smith PM, 2013, SCIENCE, V341, P569, DOI 10.1126/science.1241165
- Song H, 2016, J ALLERGY CLIN IMMUN, V137, P852, DOI 10.1016/j.jaci.2015.08.021
- Sonkoly E, 2010, J ALLERGY CLIN IMMUN, V126, P581, DOI 10.1016/j.jaci.2010.05.045
- Stec A, 2023, INT J MOL SCI, V24, DOI 10.3390/ijms24043494
- Stewart JA, 2005, J MED MICROBIOL, V54, P1239, DOI 10.1099/jmm.0.46189-0
- Suez J, 2018, CELL, V174, P1406, DOI 10.1016/j.cell.2018.08.047
- Sun LD, 2011, NAT GENET, V43, P690, DOI 10.1038/ng.851
- Szelest M, 2021, INT J MOL SCI, V22, DOI 10.3390/ijms22031104
- Taganov KD, 2006, P NATL ACAD SCI USA, V103, P12481, DOI 10.1073/pnas.0605298103
- Chapman MD, 2007, J ALLERGY CLIN IMMUN, V119, P414, DOI 10.1016/j.jaci.2006.11.001
- Tsuji G, 2017, CELL DEATH DIS, V8, DOI 10.1038/cddis.2017.322
- Turnbaugh PJ, 2007, NATURE, V449, P804, DOI 10.1038/nature06244
- Turnbaugh PJ, 2006, NATURE, V444, P1027, DOI 10.1038/nature05414
- Valenta R, 1999, CURR PROBL DERMATOL, V28, P45
- van Beijsterveldt CEM, 2007, EUR RESPIR J, V29, P516, DOI 10.1183/09031936.00065706
- Viennois E, 2019, THERANOSTICS, V9, P4542, DOI 10.7150/thno.35282
- Wang M, 2008, J ALLERGY CLIN IMMUN, V121, P129, DOI 10.1016/j.jaci.2007.09.011
- Wang ZN, 2011, NATURE, V472, P57, DOI 10.1038/nature09922
- Watanabe S, 2003, J ALLERGY CLIN IMMUN, V111, P587, DOI 10.1067/mai.2003.105
- Weidinger S, 2018, NAT REV DIS PRIMERS, V4, DOI 10.1038/s41572-018-0001-z
- Chen KD, 2022, J INVEST DERMATOL, V142, P104, DOI 10.1016/j.jid.2021.06.025
- Wells JM, 2011, P NATL ACAD SCI USA, V108, P4607, DOI 10.1073/pnas.1000092107
- Weston S, 2005, ARCH DIS CHILD, V90, P892, DOI 10.1136/adc.2004.060673
- Wickens K, 2012, CLIN EXP ALLERGY, V42, P1071, DOI 10.1111/j.1365-2222.2012.03975.x
- Wickens K, 2008, J ALLERGY CLIN IMMUN, V122, P788, DOI 10.1016/j.jaci.2008.07.011
- Wollenberg A, 2018, J EUR ACAD DERMATOL, V32, P657, DOI 10.1111/jdv.14891
- Yan FG, 2019, MOL MED REP, V20, P4645, DOI 10.3892/mmr.2019.10695
- Yang ZB, 2017, CELL IMMUNOL, V319, P53, DOI 10.1016/j.cellimm.2017.08.003
- Yatsunenko T, 2012, NATURE, V486, P222, DOI 10.1038/nature11053
- Yi JZ, 2021, EXP DERMATOL, V30, P1167, DOI 10.1111/exd.14334
- Yoshida Y, 2020, BIOCHEM BIOPH RES CO, V529, P1073, DOI 10.1016/j.bbrc.2020.06.157
- Chen W, 2008, ALLERGY, V63, P1418, DOI 10.1111/j.1398-9995.2008.01880.x
- Zhang JH, 2018, MOL PHARMACOL, V94, P1007, DOI 10.1124/mol.118.112730
- Zhernakova A, 2016, SCIENCE, V352, P565, DOI 10.1126/science.aad3369
- Zhu ZZ, 2018, NAT GENET, V50, P1753, DOI 10.1038/s41588-018-0284-8
- Zoetendal Erwin G., 2001, Microbial Ecology in Health and Disease, V13, P129, DOI 10.1080/089106001750462669
- Chen XF, 2018, EXP DERMATOL, V27, P427, DOI 10.1111/exd.13276
- Chen YX, 2022, J INVEST DERMATOL, V142, P2958, DOI 10.1016/j.jid.2022.04.021
- Chittim CL, 2019, NAT MICROBIOL, V4, P155, DOI 10.1038/s41564-018-0294-4
- Cho I, 2012, NAT REV GENET, V13, P260, DOI 10.1038/nrg3182
- Ciprandi Giorgio, 2005, Eur Ann Allergy Clin Immunol, V37, P129
- De Benedetto A, 2011, J ALLERGY CLIN IMMUN, V127, P773, DOI 10.1016/j.jaci.2010.10.018
- de Roock S, 2010, CLIN EXP ALLERGY, V40, P103, DOI 10.1111/j.1365-2222.2009.03344.x
- de Sousa TR, 2022, INT J MOL SCI, V23, DOI 10.3390/ijms23126867
- Debley JS, 2005, ANN ALLERG ASTHMA IM, V94, P228, DOI 10.1016/S1081-1206(10)61300-2
- Diepgen T, 2005, ACTA DERM-VENEREOL, P41, DOI 10.1080/03658340510012499
- Dominguez-Bello MG, 2010, P NATL ACAD SCI USA, V107, P11971, DOI 10.1073/pnas.1002601107
- Eichenfield LF, 2014, J AM ACAD DERMATOL, V71, P116, DOI 10.1016/j.jaad.2014.03.023
- Emoto T, 2016, J ATHEROSCLER THROMB, V23, P908, DOI 10.5551/jat.32672
- Esparza-Gordillo J, 2013, J ALLERGY CLIN IMMUN, V132, P371, DOI 10.1016/j.jaci.2013.01.057
- Esparza-Gordillo J, 2009, NAT GENET, V41, P596, DOI 10.1038/ng.347
- Fieten KB, 2018, INT ARCH ALLERGY IMM, V175, P77, DOI 10.1159/000484897
- Fife BT, 2008, IMMUNOL REV, V224, P166, DOI 10.1111/j.1600-065X.2008.00662.x
- Fiocchi A, 2015, WORLD ALLERGY ORGAN, V8, DOI 10.1186/s40413-015-0055-2
- Galli SJ, 2008, NATURE, V454, P445, DOI 10.1038/nature07204
- Gao J, 2018, FRONT CELL INFECT MI, V8, DOI 10.3389/fcimb.2018.00013
- Gensollen T, 2017, J ALLERGY CLIN IMMUN, V139, P1084, DOI 10.1016/j.jaci.2017.02.011
- Gold LS, 2021, J AM ACAD DERMATOL, V85, pE201, DOI 10.1016/j.jaad.2021.04.103
- Goodrich JK, 2016, CELL HOST MICROBE, V19, P731, DOI 10.1016/j.chom.2016.04.017
- Hamidi T, 2015, EPIGENOMICS-UK, V7, P247, DOI [10.2217/epi.14.80, 10.2217/EPI.14.80]
- HARADA Y, 1991, J BIOCHEM-TOKYO, V110, P501, DOI 10.1093/oxfordjournals.jbchem.a123610
- He JQ, 2003, GENES IMMUN, V4, P385, DOI 10.1038/sj.gene.6363985
- Hesson L.B., 2013, Transl. Gastrointest. Cancer, V2, P204, DOI [10.3978/j.issn.2224-4778.2013.10.03, DOI 10.1016/j.neurobiolaging.2003.12.021]
- Inan MS, 2000, GASTROENTEROLOGY, V118, P724, DOI 10.1016/S0016-5085(00)70142-9
- Irizarry RA, 2009, NAT GENET, V41, P178, DOI 10.1038/ng.298
- Islam F, 2022, EVID-BASED COMPL ALT, V2022, DOI 10.1155/2022/6144733